科研成果
以下科研成果均得到中国西南野生生物种质资源库动物种质资源库（国家重大科技基础设施）的支持
The following research achievements were supported by the Animal Branch of the Germplasm Bank of Wild Species, Chinese Academy of Sciences (the Large Research Infrastructure Funding)
-
2024
A Molecular Phylogeny of the Dove Genera Streptopelia and Columba
Historic dog Furs Unravel the Origin and Artificial Selection of Modern Nordic Lapphund and Elkhound dog Breeds
Repressor elements provide insights into tissue development and phenotypes in the pig
Hidden hotspots of amphibian biodiversity in China
Sex-biased adaptation shapes uniparental gene pools in Tibetans
Single nucleotide polymorphisms (SNPs) in the open reading frame (ORF) of prion protein gene (PRNP) in Nigerian livestock species
Kevin P. Johnson, Selvino de Kort, Karen Dinwoodey, A. C. Mateman, Carel ten Cate, C. M. Lessells, Dale H. Clayton, F. Sheldon, A Molecular Phylogeny of the Dove Genera Streptopelia and Columba, The Auk, 2024, 118(4): 874–887.
Wang SZ, Yan Y, Widlund M, Qian CC, Zhang LL, Zhang SJ, Li ZM, Cao P, Dai QY, Feng XT, Liu F, Wang L, Gao C, Fu QM, Hytönen MK, Lohi H, Savolainen P, Wang GD. Historic dog Furs Unravel the Origin and Artificial Selection of Modern Nordic Lapphund and Elkhound dog Breeds. Mol Biol Evol. 2024, 41(7): msae108.
Yue-Dong Zhang, Chao Guo, Hang Liu, Yun Gao, Yongjun Tan, Longjian Niu, Ligang Wang, Lixian Wang, David Irwin, Chunhui Hou, Zhong-Yin Zhou, Ya-Ping Zhang. 2024. Repressor elements provide insights into tissue development and phenotypes in the pig. Zoological Research.
Xu W, Wu YH, Zhou WW, Chen HM, Zhang BL, Chen JM, Xu W, Rao DQ, Zhao H, Yan F, Yuan Z, Jiang K, Jin JQ, Hou M, Zou D, Wang LJ, Zheng Y, Li JT, Jiang J, Zeng XM, Chen Y, Liao ZY, Li C, Li XY, Gao W, Wang K, Zhang DR, Lu C, Yin T, Ding Z, Zhao GG, Chai J, Zhao WG, Zhang YP, Wiens JJ, Che J. Hidden hotspots of amphibian biodiversity in China. Proc Natl Acad Sci U S A. 2024, 121(20): e2320674121.
Peng MS, Zhang YP. Sex-biased adaptation shapes uniparental gene pools in Tibetans. Sci China Life Sci. 2024, 67(3): 611-613.
Adeola AC, Bello SF, Abdussamad AM, Adedokun RAM, Olaogun SC, Abdullahi N, Mark AI, Onoja AB, Sanke OJ, Mangbon GF, Ibrahim J, Dawuda PM, Salako AE, Kdidi S, Yahyaoui MH. Single nucleotide polymorphisms (SNPs) in the open reading frame (ORF) of prion protein gene (PRNP) in Nigerian livestock species. BMC Genomics. 2024, 25(1): 177.
-
2023
Long amplicon HiFi sequencing for mitochondrial DNA genomes
Phylogenomic analyses provide insights into primate evolution
Hybrid origin of a primate, the gray snub-nosed monkey
Comparative genomics reveals the hybrid origin of a macaque group
Population structure and evolutionary history of the greater cane rat (Thryonomys swinderianus) from the Guinean Forests of West Africa
Polymorphism of prion protein gene (PRNP) in Nigerian sheep
Large-Scale Chromosomal Changes Lead to Genome-Level Expression Alterations, Environmental Adaptation, and Speciation in the Gayal (Bos frontalis)
Germline gene fusions across species reveal the chromosomal instability regions and cancer susceptibility
Genomic analysis reveals a cryptic pangolin species
New insights into the phylogeny and evolution of Chinese Ovophis (Serpentes, Viperidae): Inferred from multilocus data
Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture
Remote regulation of rs80245547 and rs72673891 mediated by transcription factors C-Jun and CREB1 affect GSTCD expression
Multiple Origins and Genomic Basis of Complex Traits in Sighthounds
Clinicopathological and immunological features of new onset kidney disease: a rare event after SARS-CoV-2 vaccination
A peptide-target-aptamer electrochemical biosensor for norovirus detection using a black phosphorous nanosheet@Ti3C2-Mxene nanohybrid and magnetic covalent organic framework
Impacts of climate change on herpetofauna diversity in the Qinghai-Tibetan Plateau
Taxonomic revision of genus Rohanixalus (Anura:Rhacophoridae) in China with description of one new species
First national record of Microhyla hmongorum Hoang, Nguyen, Phan, Pham, Ninh, Wang, Jiang, Ziegler and Nguyen, 2022 (Anura, Microhylidae, Microhyla) in China
DNA barcoding of Chinese snakes reveals hidden diversity and conservation needs
Genetic and cultural adaptations underlie the establishment of dairy pastoralism in the Tibetan Plateau
Target capture sequencing for the first Nigerian genotype I ASFV genome
Inference of ancestral alleles in the pig reference genome
Scrapie-associated polymorphisms of the prion protein gene (PRNP) in Nigerian native goats
Cai ZF, Hu JY, Yin TT, Wang D, Shen QK, Ma C, Ou DQ, Xu MM, Shi X, Li QL, Wu RN, Ajuma L, Adeola AC, Zhang YP, Peng MS. Long amplicon HiFi sequencing for mitochondrial DNA genomes. Mol Ecol Resour, 2023, 23(5):1014-1022.
Shao Y, Zhou L, Li F, Zhao L, Zhang BL, Shao F, Chen JW, Chen CY, Bi X, Zhuang XL, Zhu HL, Hu J, Sun Z, Li X, Wang D, Rivas-González I, Wang S, Wang YM, Chen W, Li G, Lu HM, Liu Y, Kuderna LFK, Farh KK, Fan PF, Yu L, Li M, Liu ZJ, Tiley GP, Yoder AD, Roos C, Hayakawa T, Marques-Bonet T, Rogers J, Stenson PD, Cooper DN, Schierup MH, Yao YG, Zhang YP, Wang W, Qi XG, Zhang G, Wu DD. Phylogenomic analyses provide insights into primate evolution. Science, 2023, 380(6648): 913-924.
Wu H, Wang Z, Zhang Y, Frantz L, Roos C, Irwin DM, Zhang C, Liu X, Wu D, Huang S, Gu T, Liu J, Yu L. Hybrid origin of a primate, the gray snub-nosed monkey. Science. 2023, 380(6648): eabl4997.
Zhang BL, Chen W, Wang Z, Pang W, Luo MT, Wang S, Shao Y, He WQ, Deng Y, Zhou L, Chen J, Yang MM, Wu Y, Wang L, Fernández-Bellon H, Molloy S, Meunier H, Wanert F, Kuderna L, Marques-Bonet T, Roos C, Qi XG, Li M, Liu Z, Schierup MH, Cooper DN, Liu J, Zheng YT, Zhang G, Wu DD. Comparative genomics reveals the hybrid origin of a macaque group. Sci Adv. 2023 Jun 2; 9(22): eadd3580.
Babarinde IA, Adeola AC, Djagoun CAMS, Nneji LM, Okeyoyin AO, Niba G, Wanzie NK, Oladipo OC, Adebambo AO, Bello SF, Ng'ang'a SI, Olaniyi WA, Okoro VMO, Adedeji BE, Olatunde O, Ayoola AO, Matouke MM, Wang YY, Sanke OJ, Oseni SO, Nwani CD, Murphy RW. Population structure and evolutionary history of the greater cane rat (Thryonomys swinderianus) from the Guinean Forests of West Africa. Front Genet. 2023; 14: 1041103.
Adeola AC, Bello SF, Abdussamad AM, Mark AI, Sanke OJ, Onoja AB, Nneji LM, Abdullahi N, Olaogun SC, Rogo LD, Mangbon GF, Pedro SL, Hiinan MP, Mukhtar MM, Ibrahim J, Saidu H, Dawuda PM, Bala RK, Abdullahi HL, Salako AE, Kdidi S, Yahyaoui MH, Yin TT. Polymorphism of prion protein gene (PRNP) in Nigerian sheep. Prion. 2023; 17(1): 44-54.
Li Y#*, Wang S#, Zhang Z#, Luo J#, Lin GL#, Deng WD#, Guo ZF#, Man FM, Wang LL, Li J, Wu SF, Liu HQ, He S, Murphy R.W., Zhang ZJ, Cooper D.N., Wu DD, Zhang YP*. Large-Scale Chromosomal Changes Lead to Genome-Level Expression Alterations, Environmental Adaptation, and Speciation in the Gayal (Bos frontalis). Molecular Biology and Evolution. 2023,40(1): msad006.
Zhou BW#, Wu QQ#, David H.M, Wang X, Zhang SR, Yin TT, Chen FL, Li C, Liu YH*, Wang GD*, Zhang YP*.Germline gene fusions across species reveal the chromosomal instability regions and cancer susceptibility. iScience. 2023,26(12): 108431.
Gu TT#, Wu H, Yang F, Gaubert P, Heighton S.P., Fu YZ, Liu K, Luo SJ*, Zhagn HR*, Hu JY*, Yu L*.Genomic analysis reveals a cryptic pangolin species. Proceedings of the National Academy of Sciences of the United States of America. 2023,120(40): e2304096120.
Zeng YM#， Li K，Liu Q,Wu YY, Hou SB,Zhao GG, Nguyen S.N., Guo P*, Shi L*. New insights into the phylogeny and evolution of Chinese Ovophis (Serpentes, Viperidae): Inferred from multilocus data. Zoologica Scripta,2023,52(4): 358–369.
Meadows, J.R.S., Kidd, J.M., Wang, GD. et al. Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture. Genome Biol. 2023, 24, 187.
Li JX#, Huang XZ#, fu WP#, Zhang XH, Mauki D.H., Zhang J, Sun C, Dai LM, Zhong L*, Yu L*, Zhang YP*.Remote regulation of rs80245547 and rs72673891 mediated by transcription factors C-Jun and CREB1 affect GSTCD expression. iScience. 2023,26(8): 107383.
Li WL#, Liu YH#, Li JX#, Ding MT#, Adeola A.C., Isakova J, A. Aldashev A.A., Peng MS, Huang XZ, Xie GL, Chen X, Yang WK, Zhou WW, Ghanatsaman Z.A., Olaogun S.C., Sanke O.J., Dawuda P.M., Hytönen K.M., Lohi L, Esmailizadeh A.*, Poyarkov A.D.*, Savolainen P*,Wang GD*,Zhang YP*.Multiple Origins and Genomic Basis of Complex Traits in Sighthounds. Molecular Biology and Evolution. 2023,40(8): msad158.
Zhang YM, Liu XZ, Zhang Z, Zhou TC, Zhang X, Yang HY, Tan M, Hu N, Shi SF, Wang F, Xu R, Liu LJ, Wang SX, Liu G, Zhou FD, Zhao MH, Zhang H, Lv JC, Zhang YP, Zhang ZJ, Yang L. Clinicopathological and immunological features of new onset kidney disease: a rare event after SARS-CoV-2 vaccination. Natl Sci Rev. 2023, 10(5):nwac034.
Liu H, Ma S, Ning G, Zhang R, Liang H, Liu F, Xiao L, Guo L, Zhang Y, Li CP, Zhao H. A "peptide-target-aptamer" electrochemical biosensor for norovirus detection using a black phosphorous nanosheet@Ti3C2-Mxene nanohybrid and magnetic covalent organic framework. Talanta. 2023, 258: 124433.
Karuno AP, Mi X, Chen Y, Zou DH, Gao W, Zhang BL, Xu W, Jin JQ, Shen WJ, Huang S, Zhou WW, Che J. Impacts of climate change on herpetofauna diversity in the Qinghai-Tibetan Plateau. Conserv Biol. 2023, 37(6): e14155.
Liu XL, Huang JK, Stuart BL, Ai RD, Bernstein JM, Suwannapoom C, Chomdej S, Che J, Yuan ZY. Taxonomic revision of genus Rohanixalus (Anura: Rhacophoridae) in China with description of one new species. Zool Res. 2023, 44(6): 1146-1151.
Wu YH#, Yu ZB#, Lu CQ, Felista K.K., Hou SB, Jin JQ, Chen JM, Zhang DR, Yuan ZY, Che J*.First national record of Microhyla hmongorum Hoang, Nguyen, Phan, Pham, Ninh, Wang, Jiang, Ziegler and Nguyen, 2022 (Anura, Microhylidae, Microhyla) in China. Biodiversity Data Journal, 2023, 11(): e103580.
Wu YH, Hou SB, Yuan ZY, Jiang K, Huang RY, Wang K, Liu Q, Yu ZB, Zhao HP, Zhang BL, Chen JM, Wang LJ, Stuart BL, Chambers EA, Wang YF, Gao W, Zou DH, Yan F, Zhao GG, Fu ZX, Wang SN, Jiang M, Zhang L, Ren JL, Wu YY, Zhang LY, Yang DC, Jin JQ, Yin TT, Li JT, Zhao WG, Murphy RW, Huang S, Guo P, Zhang YP, Che J. DNA barcoding of Chinese snakes reveals hidden diversity and conservation needs. Mol Ecol Resour. 2023, 23(5): 1124-1141.
Peng MS, Liu YH, Shen QK, Zhang XH, Dong J, Li JX, Zhao H, Zhang H, Zhang X, He Y, Shi H, Cui C, Ouzhuluobu, Wu TY, Liu SM, Gonggalanzi, Baimakangzhuo, Bai C, Duojizhuoma, Liu T, Dai SS, Murphy RW, Qi XB, Dong G, Su B, Zhang YP. Genetic and cultural adaptations underlie the establishment of dairy pastoralism in the Tibetan Plateau. BMC Biol. 2023, 21(1): 208.
Adeola AC, Luka PD, Jiang XX, Cai ZF, Oluwole OO, Shi X, Oladele BM, Olorungbounmi TO, Boladuro B, Omotosho O, Okoro VMO, Dawuda PM, Olaogun SC, Sanke OJ, Xie HB, Bishop RP, Han J, Li J, Zhang YP, Peng MS. Target capture sequencing for the first Nigerian genotype I ASFV genome. Microb Genom. 2023, 9(7): mgen001069.
Yan C, Xie HB, Adeola AC, Fu Y, Liu X, Zhao S, Han J, Peng MS, Zhang YP. Inference of ancestral alleles in the pig reference genome. Anim Genet. 2023 , 54(5): 649-651.
Adeola AC, Bello SF, Abdussamad AM, Mark AI, Sanke OJ, Onoja AB, Nneji LM, Abdullahi N, Olaogun SC, Rogo LD, Mangbon GF, Pedro SL, Hiinan MP, Mukhtar MM, Ibrahim J, Saidu H, Dawuda PM, Bala RK, Abdullahi HL, Salako AE, Kdidi S, Yahyaoui MH, Yin TT. Scrapie-associated polymorphisms of the prion protein gene (PRNP) in Nigerian native goats. Gene. 2023, 855: 147121.
-
2022
Discovery of a wild, genetically pure Chinese giant salamander creates new conservation opportunities.
African Suid Genomes Provide Insights into the Local Adaptation to Diverse African Environments
Scrapie-associated polymorphisms of the prion protein gene (PRNP) in Nigerian native goats
Species persistence with hybridization in toad-headed lizards driven by divergentselection and low recombination
The highest-elevation frog provides insights into mechanisms and evolution of defenses against high UV radiation
Chromosome-level genome assembly of the Muscovy duck provides insight into fatty liver susceptibility
Phylogenetic diversity only weakly mitigates climate-change-driven biodiversity loss in insect communities
Association of MC1R variation and plumage colour diversity of Nigerian domestic pigeon (Columba livia domestica)
Functional genomics analysis reveals the evolutionary adaptation and demographic history of pygmy lorises
Associations of autozygosity with economic important traits in a cross of Eurasian pigs
Revision of the Diploderma fasciatum (Mertens, 1926) Complex (Reptilia: Agamidae: Draconinae)
云南高黎贡山发现僜湍蛙和察隅湍蛙
云南省两栖类物种名录修订
The genetic echo of the Tarim mummies in modern Central Asians
Hologenomic Insights into Mammalian Adaptations to Myrmecophagy
Comparative multi-locus assessment of modern Asian Newts (Cynops, Paramesotriton, and Pachytriton: Salamandridae) in southern China suggests a shared biogeographic history
Uncovering the enigmatic evolution of bears in greater depth: the hybrid origin of Asiatic black bear
A single-nucleus transcriptomic atlas of the dog hippocampus reveals the potential relationship between specific cell types and domestication
Genome-wide identification of functional enhancers and their potential roles in pig breeding
Discovery of a wild, genetically pure Chinese giant salamander creates new conservation opportunities
Genome-wide investigations reveal the population structure and selection signatures of Nigerian cattle adaptation in the sub-Saharan tropics
Genetic diversity and population structure of muscovy duck (Cairina moschata) from Nigeria
First Record Of Kurixalus odontotarsus (Ye Et Fei, 1993) and Raorchestes Longchuanensis (Yang Et Li, 1978) (Anura: Rhacophoridae) in Thailand
Genomic adaptations for arboreal locomotion in Asian flying treefrogs
Historical mitochondrial genome introgression confounds species delimitation: evidence from phylogenetic inference in the Odorrana grahami species complex
Distribution extension of Leptobrachella eos (Ohler, Wollenberg, Grosjean, Hendrix, Vences, Ziegler & Dubois, 2011): first record from Thailand
云南省爬行动物名录和地理区划更新
Jing Chai, Chen-Qi Lu, Mu-Rong Yi, Nian-Hua Dai, Xiao-Dong Weng, Ming-Xiao Di, Yong Peng, Yong Tang, Qing-Hua Shan, Kai Wang, Huan-Zhang Liu, Hai-Peng Zhao, Jie-Qiong Jin, Ru-Jun Cao, Ping Lu, Lai-Chun Luo, Robert W. Murphy, Ya-Ping Zhang, Jing Che. Discovery of a wild, genetically pure Chinese giant salamander creates new conservation opportunities. Zoological Research, 2022, 43(3): 469-480.
Hai-Bing Xie, Chen Yan, Adeniyi C Adeola, Kun Wang, Cui-Ping Huang, Ming-Min Xu, Qiang Qiu, Xue Yin, Chen-Yu Fan, Yun-Fei Ma, Ting-Ting Yin, Yun Gao, Jia-Kun Deng, Agboola O Okeyoyin, Olufunke O Oluwole, Oladipo Omotosho, Victor M O Okoro, Ofelia G Omitogun, Philip M Dawuda, Sunday C Olaogun, Lotanna M Nneji, Adeola O Ayoola, Oscar J Sanke, Pam D Luka, Edward Okoth, Isaac Lekolool, Dominic Mijele, Richard P Bishop, Jianlin Han, Wen Wang, Min-Sheng Peng, Ya-Ping Zhang, African Suid Genomes Provide Insights into the Local Adaptation to Diverse African Environments, Molecular Biology and Evolution, 2022, 39(12): 256.
Adeola AC, Bello SF, Abdussamad AM, Mark AI, Sanke OJ, Onoja AB, Nneji LM, Abdullahi N, Olaogun SC, Rogo LD, Mangbon GF, Pedro SL, Hiinan MP, Mukhtar MM, Ibrahim J, Saidu H, Dawuda PM, Bala RK, Abdullahi HL, Salako AE, Kdidi S, Yahyaoui MH, Yin TT. Scrapie-associated polymorphisms of the prion protein gene (PRNP) in Nigerian native goats. Gene. 2023; 855: 147121.
Gao W#, Yu CX#, Zhou WW#, Zhang BL, Chambers E.A, Hollis A. D, Jin JQ, Murphy R.W, Zhang YP*, Che J*. Species persistence with hybridization in toad-headed lizards driven by divergentselection and low recombination. Molecular Biology and Evolution. 2022, 39(4): msac064.
Fu TT#, Sun YB#, Gao W#, Long CB, Yang CH, Yang XW, Zhang Y, Lan XQ, Huang S, Jin JQ, Murphy RW, Zhang Y*, Lai R*, Hillis DM*, Zhang YP*, Che J*.The highest-elevation frog provides insights into mechanisms and evolution of defenses against high UV radiation. Proceedings of the National Academy of Sciences. 2022,119(46): e2212406119.
Xu MM#, Gu LH#, Lv WY#, Duan SC, Li LW, Du Y, Lu LZ, Zeng T, Hou ZC, Ma ZS, Chen W, Adeola A.C., Han JL, Xu TS*, Dong Y*, Zhang YP*, Peng MS*. Chromosome-level genome assembly of the Muscovy duck provides insight into fatty liver susceptibility. Genomics. 2022,114(6): 110518.
Li Z, Linard B, Vogler AP, Yu DW, Wang Z. Phylogenetic diversity only weakly mitigates climate-change-driven biodiversity loss in insect communities. Mol Ecol. 2023 Dec;32(23): 6147-6160.
Jiang XX#,Adeola AC*,Sola-Ojo FE,Abubakar IA, Bello SF, Peng MS, Zhang YP*. Association of MC1R variation and plumage colour diversity of Nigerian domestic pigeon (Columba livia domestica). Journal of Advanced Veterinary and Animal Research. 2022, 9(3): 369-373.
Li ML#, Wang S#, Xu PH#, Tian HY#, Bai MX, Zhang YP, Shao Y, Xiong ZJ, Qi XG, Cooper ND, Zhang GJ, Zhu HL, Wu DD*. Functional genomics analysis reveals the evolutionary adaptation and demographic history of pygmy lorises. Proceedings of the National Academy of Sciences. 2022, 119(40): e2123030119.
Tao L, Wang LG, Adeola AC, Zhang LC, Li LW, Li QL, Cen DJ, Yan C, Ma ZS, Wang LX, Xie HB, Zhang YP. Associations of autozygosity with economic important traits in a cross of Eurasian pigs. J Genet Genomics. 2023,50(3): 216-220.
Wang K#, Qi S, Wang J, K¨ohler G, Lu CQ, Lyu ZT, Wang J, Wang YY, Che J*. Revision of the Diploderma fasciatum (Mertens, 1926) Complex (Reptilia: Agamidae: Draconinae). Ichthyology & Herpetology. 2022,110(3): 511–525.
于中斌, 侯绍兵, 陈天恩, 安东, 赵海鹏, 柳青, 熊云, 朱林, 吴云鹤, 车静. 云南高黎贡山发现僜湍蛙和察隅湍蛙. 动物学杂志,2022,57(5): 722-731.
袁智勇, 陈进民, 吴云鹤, 李先琦, 车静. 云南省两栖类物种名录修订. 生物多样性, 2022,30(4): 21470.
Dai SS#, Sulaiman X#, Isakova J#, Xu WF#, Abdulloevich NT, Afanasevna ME, Ibrohimovich KB, Chen X, Yang WK, Wang MS, Shen QK, Yang XY, Yao YG, Aldashev AA, Saidov A, Chen W, Cheng LF*, Peng MS*,Zhang YP*. The genetic echo of the Tarim mummies in modern Central Asians. Molecular Biology and Evolution. 2022,39(9): msac179.
Cheng SC, Liu CB, Yao XQ, Hu JY, Yin TT, Lim BK, Chen W, Wang GD, Zhang CL, Irwin DM, Zhang ZG, Zhang YP, Yu L. Hologenomic insights into mammalian adaptations to myrmecophagy. Natl Sci Rev. 2022 Aug 24;10(4): nwac174.
Yuan ZY#, Wu YH#, Yan F, Murphy R.W., Papenfuss T.J., Wake D.B., Zhang YP*, Che J*..Comparative multi-locus assessment of modern Asian Newts (Cynops, Paramesotriton, and Pachytriton: Salamandridae) in southern China suggests a shared biogeographic history. Zoological Research. 2022,43(5): 706-718.
Zou TT#, Kuang WM#, Yin TT, Frant L, Zhang C, Liu JQ*, Wu H*,Yu L*. Uncovering the enigmatic evolution of bears in greater depth: the hybrid origin of Asiatic black bear. Proceedings of the National Academy of Sciences. 2022, 119(31): e2120307119.
Zhou QJ, Liu X, Zhang L, Wang R, Yin T, Li X, Li G, He Y, Ding Z, Ma P, Wang SZ, Mao B, Zhang S, Wang GD. A single-nucleus transcriptomic atlas of the dog hippocampus reveals the potential relationship between specific cell types and domestication. Natl Sci Rev. 2022 Jul 23; 9(11): nwac147.
Wu YQ#, Zhang YD#, Liu H, Gao Y, Liu YY, Chen L, Liu L, Iwrin D.M., Hou CH, Zhou ZY*, Zhang YP*. Genome-wide identification of functional enhancers and their potential roles in pig breeding. Journal of Animal Science and Biotechnology. 2022, 13(1): 75.
Chai J, Lu CQ, Yi MR, Dai NH, Weng XD, Di MX, Peng Y, Tang Y, Shan QH, Wang K, Liu HZ, Zhao HP, Jin JQ, Cao RJ, Lu P, Luo LC, Murphy RW, Zhang YP, Che J. Discovery of a wild, genetically pure Chinese giant salamander creates new conservation opportunities. Zool Res. 2022 May 18;43(3): 469-480.
Mauki DH#, Tijjani A Ma C, Said I. Ng’ang’a, Akanbi IM, Sanke OJ, Abdussamad AM, Olaogun SC, Ibrahim J, Dawuda PM, Mangbon GF, Rudovick RK, Gwakisa PS, Yin TT, Li Y, Peng MS, Adeola AC*, Zhang YP*. Genome-wide investigations reveal the population structure and selection signatures of Nigerian cattle adaptation in the sub-Saharan tropics. BMC Genomics, 2022, 23(1): 306.
Adeola A.C.#*, Sola-Ojo F.E. ,Opeyemi Y.A., Oguntunji A.O.,Nneji L.M., Ewuola M.K., Bello S.F., Olaniyi W.A., Adesoji A.T., Karuno A.P., Sanke O.J., Daniel E.L.. Genetic diversity and population structure of muscovy duck (Cairina moschata) from Nigeria. PeerJ, 2022, 10(0): e13236.
Wu YH#, Suwannapoom C#, Poyarkov NA, Gao W, Karuno AP, Yuan ZY, Che J*.First Record Of Kurixalus odontotarsus (Ye Et Fei, 1993) and Raorchestes Longchuanensis (Yang Et Li, 1978) (Anura: Rhacophoridae) in Thailand. Russian Journal of Herpetology. 2022,29(1).
Wu W, Gao YD, Jiang DC, Lei J, Ren JL, Liao WB, Deng C, Wang Z, Hillis DM, Zhang YP, Li JT. Genomic adaptations for arboreal locomotion in Asian flying treefrogs. Proc Natl Acad Sci U S A. 2022 Mar 29; 119(13): e2116342119.
Yuan Z, Wu D, Wen Y, Xu W, Gao W, Dahn HA, Liu X, Jin J, Yu C, Xiao H, Che J. Historical mitochondrial genome introgression confounds species delimitation: evidence from phylogenetic inference in the Odorrana grahami species complex. Curr Zool. 2022 Feb 17;69(1): 82-90.
Wu YH#, Chen JM#, Pawangkhanant P, Yothawut C, Karuno A.P., Suwannapoom C*, Che J*. Distribution extension of Leptobrachella eos (Ohler, Wollenberg, Grosjean, Hendrix, Vences, Ziegler & Dubois, 2011): first record from Thailand. Herpetozoa. 2022,29(1): 25–32.
王剀#*, 吕植桐, 王健, 齐硕, 车静*. 云南省爬行动物名录和地理区划更新. 生物多样性,2022,30(4): 21326.
-
2021
Behavioral evidence for the origin of Chinese Kunming dog
Description of a new species of Bush frog (Anura: Rhacophoridae: Raorchestes) from northwestern Yunnan, China
Genetic architecture underlying nascent speciation of Eurasian domestic pigs
Genetic variation of Nigerian cattle inferred from maternal and paternal genetic markers
Genomes reveal selective sweeps in kiang and donkey for high-altitude adaptation
Genomic analyses unveil helmeted guinea fowl (Numida meleagris) domestication in West Africa
Large-scale genomic analysis reveals the genetic cost of chicken domestication
Mitochondrial DNA variation of Nigerian dromedary camel (Camelus dromedarius)
Molecular phylogeny and morphological comparisons of the genus Hebius Thompson, 1913 (Reptilia: Squamata: Colubridae) uncover a new taxon from Yunnan Province, China, and support revalidation of Hebius septemlineatus (Schmidt, 1925)
Multi-locus genetic analyses of Quasipaa from throughout its distribution
Phylogenetic analyses of distantly related clades of bent‑toed geckos (genus Cyrtodactylus) reveal an unprecedented amount of cryptic diversity in northern and western Thailand
Population Genomics Reveals Incipient Speciation, Introgression, and Adaptation in the African Mona Monkey (Cercopithecus mona)
Single-cell RNA-sequencing Reveals Thoracolumbar Vertebra Heterogeneity and Rib-genesis in Pigs
The high diversity of SARS-CoV-2-related coronaviruses in pangolins alters potential ecological risks
Two new species and a new country record of the genus Achalinus (Reptilia:Squamata: Xenodermidae) from China
Two New Species of Diploderma Hallowell, 1861 (Reptilia: Squamata: Agamidae) from the Hengduan Mountain Region in China and Rediscovery of D. brevicaudum (Manthey, Wolfgang, Hou, Wang, 2012)
Whole genome analyses reveal significant convergence in obsessive-compulsive disorder between humans and dogs
Whole-genome sequencing reveals a lactase persistence adaption in European dogs
Contribution to the taxonomy of the genus Lycodon H. Boie in Fitzinger, 1827 (Reptilia: Squamata: Colubridae) in China, with description of two new species and resurrection and elevation of Dinodon septentrionale chapaense Angel, Bourret, 1933
First national record of Gracixalus quangi Rowley, Dau, Nguyen, Cao & Nguyen, 2011 and G. yunnanensis Yu, Li, Wang, Rao, Wu &Yang, 2019 (Amphibia: Anura: Rhacophoridae) from Thailand
First national record of Quasipaaverrucospinosa (Bourret, 1937) (Amphibia: Anura: Dicroglossidae) from Thailand with further comment on its taxonomic status
First national record of Gracixalus quangi Rowley, Dau, Nguyen, Cao & Nguyen, 2011 and G. yunnanensis Yu, Li, Wang, Rao, Wu &Yang, 2019 (Amphibia: Anura: Rhacophoridae) from Thailand
First records of the fanged frogs Limnonectes bannaensis Ye, Fei & Jiang, 2007 and L. utara Matsui, Belabut & Ahmad, 2014 (Amphibia: Anura: Dicroglossidae) in Thailand
Integrative taxonomy reveals a new species of Leptobrachella (Anura: Megophryidae) from the mountains of northern Thailand
Systematic revision of mountain dragons (Reptilia: Agamidae: Diploderma) in China, with descriptions of six new species and discussion on their conservation
Two New Species of Diploderma Hallowell, 1861 (Reptilia: Squamata: Agamidae) from the Hengduan Mountain Region in China and Rediscovery of D. brevicaudum (Manthey, Wolfgang, Hou, Wang, 2012)
Li JX, Huang QG, Wang SZ, Zhou QJ, Gao X, Zhang YP, Wang GD. Behavioral evidence for the origin of Chinese Kunming dog. Curr Zool. 2021, 67(4): 469-471.
Wu YH, Liu XL, Gao W, Wang YF, Li YC, Zhou WW, Yuan ZY, Che J. Description of a new species of Bush frog (Anura: Rhacophoridae: Raorchestes) from northwestern Yunnan, China. Zootaxa. 2021, 4941(2): zootaxa.4941.2.5.
Xie HB, Wang LG, Fan CY, Zhang LC, Adeola AC, Yin X, Zeng ZB, Wang LX, Zhang YP. Genetic Architecture Underlying Nascent Speciation-The Evolution of Eurasian Pigs under Domestication. Mol Biol Evol. 2021, 38(9): 3556-3566.
Mauki DH, Adeola AC, Ng'ang'a SI, Tijjani A, Akanbi IM, Sanke OJ, Abdussamad AM, Olaogun SC, Ibrahim J, Dawuda PM, Mangbon GF, Gwakisa PS, Yin TT, Peng MS, Zhang YP. Genetic variation of Nigerian cattle inferred from maternal and paternal genetic markers. PeerJ. 2021, 9: e10607.
Zeng L, Liu HQ, Tu XL, Ji CM, Gou X, Esmailizadeh A, Wang S, Wang MS, Wang MC, Li XL, Charati H, Adeola AC, Moshood Adedokun RA, Oladipo O, Olaogun SC, Sanke OJ, Godwin F M, Cecily Ommeh S, Agwanda B, Kasiiti Lichoti J, Han JL, Zheng HK, Wang CF, Zhang YP, Frantz LAF, Wu DD. Genomes reveal selective sweeps in kiang and donkey for high-altitude adaptation. Zool Res, 2021, 42(4): 450-460.
Shen QK, Peng MS, Adeola AC, Kui L, Duan S, Miao YW, Eltayeb NM, Lichoti JK, Otecko NO, Strillacci MG, Gorla E, Bagnato A, Charles OS, Sanke OJ, Dawuda PM, Okeyoyin AO, Musina J, Njoroge P, Agwanda B, Kusza S, Nanaei HA, Pedar R, Xu MM, Du Y, Nneji LM, Murphy RW, Wang MS, Esmailizadeh A, Dong Y, Ommeh SC, Zhang YP. Genomic Analyses of Unveil Helmeted Guinea Fowl (Numida meleagris) Domestication in West Africa. Genome Biol Evol. 2021, 13(6): evab090.
Wang MS, Zhang JJ, Guo X, Li M, Meyer R, Ashari H, Zheng ZQ, Wang S, Peng MS, Jiang Y, Thakur M, Suwannapoom C, Esmailizadeh A, Hirimuthugoda NY, Zein MSA, Kusza S, Kharrati-Koopaee H, Zeng L, Wang YM, Yin TT, Yang MM, Li ML, Lu XM, Lasagna E, Ceccobelli S, Gunwardana HGTN, Senasig TM, Feng SH, Zhang H, Bhuiyan AKFH, Khan MS, Silva GLLP, Thuy LT, Mwai OA, Ibrahim MNM, Zhang G, Qu KX, Hanotte O, Shapiro B, Bosse M, Wu DD, Han JL, Zhang YP. Large-scale genomic analysis reveals the genetic cost of chicken domestication. BMC Biol. 2021, 19(1): 118.
Xueqi W, Abdussamad AM, Ibrahim J, Sanke OJ, Olaniyi WA, Dawuda PM, Pan HC, Peng MS, Adeola AC, Zhang YP. Mitochondrial DNA variation of Nigerian dromedary camel (Camelus dromedarius). Anim Genet, 2021, 52(4): 570-572.
Hou SB, Yuan ZY, Wei PF, Zhao GG, Liu GH, Wu YH, Shen WJ, Chen JM, Guo P, Che J. Molecular phylogeny and morphological comparisons of the genus Hebius Thompson, 1913 (Reptilia: Squamata: Colubridae) uncover a new taxon from Yunnan Province, China, and support revalidation of Hebius septemlineatus (Schmidt, 1925). Zool Res. 2021, 42(5): 620-625.
Yan F, Nneji LM, Jin JQ, Yuan ZY, Chen JM, Mi X, Chen HM, Murphy RW, Che J. Multi-locus genetic analyses of Quasipaa from throughout its distribution. Mol Phylogenet Evol. 2021, 163:107218.
Chomdej S, Pradit W, Suwannapoom C, Pawangkhanant P, Nganvongpanit K, Poyarkov NA, Che J, Gao Y, Gong S. Phylogenetic analyses of distantly related clades of bent-toed geckos (genus Cyrtodactylus) reveal an unprecedented amount of cryptic diversity in northern and western Thailand. Sci Rep. 2021, 11(1): 2328.
Ayoola AO, Zhang BL, Meisel RP, Nneji LM, Shao Y, Morenikeji OB, Adeola AC, Ng'ang'a SI, Ogunjemite BG, Okeyoyin AO, Roos C, Wu DD. Population Genomics Reveals Incipient Speciation, Introgression, and Adaptation in the African Mona Monkey (Cercopithecus mona). Mol Biol Evol, 2021, 38(3): 876-890.
Li J, Wang L, Yu D, Hao J, Zhang L, Adeola AC, Mao B, Gao Y, Wu S, Zhu C, Zhang Y, Ren J, Mu C, Irwin DM, Wang L, Hai T, Xie H, Zhang Y. Single-cell RNA Sequencing Reveals Thoracolumbar Vertebra Heterogeneity and Rib-genesis in Pigs. Genomics Proteomics Bioinformatics, 2021, 19(3): 423-436.
Peng MS, Li JB, Cai ZF, Liu H, Tang X, Ying R, Zhang JN, Tao JJ, Yin TT, Zhang T, Hu JY, Wu RN, Zhou ZY, Zhang ZG, Yu L, Yao YG, Shi ZL, Lu XM, Lu J, Zhang YP. The high diversity of SARS-CoV-2-related coronaviruses in pangolins alerts potential ecological risks. Zool Res, 202, 42(6): 834-844.
Hou SB, Wang K, Guo P, Chen JM, Yuan ZY, Che J. Two new species and a new country record of the genus Achalinus (Reptilia: Squamata: Xenodermidae) from China. Zootaxa, 2021, 4950(3): zootaxa.4950.3.6.
Wang K, Gao W, Wu J, Dong W, Feng X, Shen W, Jin J, Shi X, Qi Y, Siler CD, Che J. Two New Species of Diploderma Hallowell, 1861 (Reptilia: Squamata: Agamidae) from the Hengduan Mountain Region in China and Rediscovery of D. brevicaudum (Manthey, Wolfgang, Hou, Wang, 2012). Zootaxa, 2021, 4941(1): zootaxa.4941.1.1.
Cao X, Liu WP, Cheng LG, Li HJ, Wu H, Liu YH, Chen C, Xiao X, Li M, Wang GD, Zhang YP. Whole genome analyses reveal significant convergence in obsessive-compulsive disorder between humans and dogs. Sci Bull (Beijing). 2021, 66(2): 187-196.
Liu YH, Wang L, Zhang Z, Otecko NO, Khederzadeh S, Dai Y, Liang B, Wang GD, Zhang YP. Whole-Genome Sequencing Reveals Lactase Persistence Adaptation in European Dogs. Mol Biol Evol, 2021, 38(11): 4884-4890.
Wang K, Yu ZB, Vogel G, Che J. Contribution to the taxonomy of the genus Lycodon H. Boie in Fitzinger, 1827 (Reptilia: Squamata: Colubridae) in China, with description of two new species and resurrection and elevation of Dinodon septentrionale chapaense Angel, Bourret, 1933. Zool Res, 2021, 42(1):62-86.
Lorphengsy S, Nguyen TV, Poyarkov NA, Wu YH, Pawangkhanant P, Passorn S, Che J, Suwannapoom C. First national record of Gracixalus quangi Rowley, Dau, Nguyen, Cao & Nguyen, 2011 and G. yunnanensis Yu, Li, Wang, Rao, Wu &Yang, 2019 (Amphibia: Anura: Rhacophoridae) from Thailand. Biodiversity Data Journal, 2021, 9: e67667.
Suwannapoom C, Nguyen TV, Poyarkov NA, Wu YH, Pawangkhanant P, Lorphengsy S, Che J. First national record of Quasipaaverrucospinosa (Bourret, 1937) (Amphibia: Anura: Dicroglossidae) from Thailand with further comment on its taxonomic status. Biodivers Data J, 2021, 9:,e70473.
Lorphengsy S, Nguyen TV, Poyarkov NA, Wu YH, Pawangkhanant P, Passorn S, Che J, Suwannapoom C. First national record of Gracixalus quangi Rowley, Dau, Nguyen, Cao & Nguyen, 2011 and G. yunnanensis Yu, Li, Wang, Rao, Wu &Yang, 2019 (Amphibia: Anura: Rhacophoridae) from Thailand. Biodivers Data J, 2021, 9: e67667.
Suwannapoom C, Jiang K, Wu YH, Pawangkhanant P, Lorphengsy S, Nguyen TV, Poyarkov NA, Che J. First records of the fanged frogs Limnonectes bannaensis Ye, Fei & Jiang, 2007 and L. utara Matsui, Belabut & Ahmad, 2014 (Amphibia: Anura: Dicroglossidae) in Thailand. Biodivers Data J. 2021, 9: e67253.
Chen JM, Suwannapoom C, Wu YH, Poyarkov NA, Xu K, Pawangkhanant P, Che J. Integrative taxonomy reveals a new species of Leptobrachella (Anura: Megophryidae) from the mountains of northern Thailand. Zootaxa, 2021, 5052(2): 41-64.
Wang, K, Ren, J, Wu, J, et al. Systematic revision of mountain dragons (Reptilia: Agamidae: Diploderma) in China, with descriptions of six new species and discussion on their conservation. J Zool Syst Evol Res. 2021; 59: 222– 263.
Wang K, Gao W, Wu J, Dong W, Feng X, Shen W, Jin J, Shi X, Qi Y, Siler CD, Che J. Two New Species of Diploderma Hallowell, 1861 (Reptilia: Squamata: Agamidae) from the Hengduan Mountain Region in China and Rediscovery of D. brevicaudum (Manthey, Wolfgang, Hou, Wang, 2012). Zootaxa, 2021, 4941(1): zootaxa.4941.1.1.
-
2020
863 genomes reveal the origin and domestication of chicken
A combined approach of mitochondrial DNA and anchored nuclear phylogenomics sheds light on unrecognized diversity, phylogeny, and historical biogeography of the torrent frogs, genus Amolops (Anura: Ranidae)
Amphibian assemblages and diversity patterns in two forest ecosystems of South-Eastern Nigeria
An integrative phylogenomic approach illuminates the evolutionary history of Old World tree frogs (Anura: Rhacophoridae)
Comparative population genomic analysis uncovers novel genomic footprints and genes associated with small body size in Chinese pony
DNA Barcoding Silver Butter Catfish (Schilbe intermedius) Reveals Patterns of Mitochondrial Genetic Diversity Across African River Systems
Genome and single-cell RNA-sequencing of the earthworm Eisenia andrei identifies cellular mechanisms underlying regeneration
Genome-wide identification of imprinted genes in pigs and their different imprinting status compared with other mammals
Genomic consequences of population decline in critically endangered pangolins and their demographic histories
Herpetological phylogeographic analyses support a Miocene focal point of Himalayan uplift and biological diversification
How little is known about "the little brown frogs": description of three new species of the genus Leptobrachella (Anura: Megophryidae) from Yunnan Province, China
Mitochondrial DNA variation of Nigerian Muscovy duck (Cairina moschata)
New country records for three species of frog from Myanmar including two genera (Nasutixalus and Oreolalax)
OrthReg: A Tool to Predict Cis-regulatory Elements Based on Cross-species Orthologous Sequence Conservation
Testing the Effectiveness of DNA Barcoding for Biodiversity Assessment of Moths from Nigeria
Whole genome resequencing of the Iranian native dogs and wolves to unravel variome during dog domestication
Whole genome resequencing reveals an association of ABCC4 variants with preaxial polydactyly in pigs
CaptureProbe: a java tool for designing probes for Capture Hi-C applications
Genomic and Phenotypic Analyses Reveal Mechanisms Underlying Homing Ability in Pigeon
A new species of the genus Sinomicrurus (Serpentes: Elapidae) from China and Vietnam
DNA barcoding and species delimitation of butterflies (Lepidoptera) from Nigeria
Out of the Hengduan Mountains: Molecular phylogeny and historical biogeography of the Asian water snake genus Trimerodytes (Squamata: Colubridae)
Wang MS, Thakur M, Peng MS et al. 863 genomes reveal the origin and domestication of chicken. Cell Res, 2020, 30: 693–701.
Wu YH, Yan F, Stuart BL, Prendini E, Suwannapoom C, Dahn HA, Zhang BL, Cai HX, Xu YB, Jiang K, Chen HM, Lemmon AR, Lemmon EM, Raxworthy CJ, Orlov NL, Murphy RW, Che J. A combined approach of mitochondrial DNA and anchored nuclear phylogenomics sheds light on unrecognized diversity, phylogeny, and historical biogeography of the torrent frogs, genus Amolops (Anura: Ranidae). Mol Phylogenet Evol, 2020,148: 106789.
Rahman MM, Nneji LM, Adeniyi AC, et al. Amphibian assemblages and diversity patterns in two forest ecosystems of South-Eastern Nigeria. Afr J Ecol, 2020,58: 815–827.
Jin-Min Chen, Elizabeth Prendini, Yun-He Wu, Bao-Lin Zhang, Chatmongkon Suwannapoom, Hong-Man Chen, Jie-Qiong Jin, Emily Moriarty Lemmon, Alan R. Lemmon, Bryan L. Stuart, Christopher J. Raxworthy, Robert W. Murphy, Zhi-Yong Yuan, Jing Che. An integrative phylogenomic approach illuminates the evolutionary history of Old World tree frogs (Anura: Rhacophoridae). Molecular Phylogenetics and Evolution, 2020,145: 106724.
Asadollahpour Nanaei H, Esmailizadeh A, Ayatollahi Mehrgardi A, Han J, Wu DD, Li Y, Zhang YP. Comparative population genomic analysis uncovers novel genomic footprints and genes associated with small body size in Chinese pony. BMC Genomics, 2020,21(1): 496.
Nneji LM, Adeola AC, Mustapha MK, Oladipo SO, Djagoun CAMS, Nneji IC, Adedeji BE, Olatunde O, Ayoola AO, Okeyoyin AO, Ikhimiukor OO, Useni GF, Iyiola OA, Faturoti EO, Matouke MM, Ndifor WK, Wang YY, Chen J, Wang WZ, Kachi JB, Ugwumba OA, Ugwumba AAA, Nwani CD. DNA Barcoding Silver Butter Catfish (Schilbe intermedius) Reveals Patterns of Mitochondrial Genetic Diversity Across African River Systems. Sci Rep, 2020, 10(1): 7097.
Shao Y, Wang XB, Zhang JJ, Li ML, Wu SS, Ma XY, Wang X, Zhao HF, Li Y, Zhu HH, Irwin DM, Wang DP, Zhang GJ, Ruan J, Wu DD. Genome and single-cell RNA-sequencing of the earthworm Eisenia andrei identifies cellular mechanisms underlying regeneration. Nat Commun, 2020,11(1): 2656.
Wu YQ, Zhao H, Li YJ, Khederzadeh S, Wei HJ, Zhou ZY, Zhang YP. Genome-wide identification of imprinted genes in pigs and their different imprinting status compared with other mammals. Zool Res. 2020,41(6): 721-725.
Hu JY, Hao ZQ, Frantz L, Wu SF, Chen W, Jiang YF, Wu H, Kuang WM, Li H, Zhang YP, Yu L. Genomic consequences of population decline in critically endangered pangolins and their demographic histories. Natl Sci Rev, 2020,7(4): 798-814.
Xu W, Dong WJ, Fu TT, Gao W, Lu CQ, Yan F, Wu YH, Jiang K, Jin JQ, Chen HM, Zhang YP, Hillis DM, Che J. Herpetological phylogeographic analyses support a Miocene focal point of Himalayan uplift and biological diversification. Natl Sci Rev, 2020,8(9): nwaa263.
Chen JM, Xu K, Poyarkov NA, Wang K, Yuan ZY, Hou M, Suwannapoom C, Wang J, Che J. How little is known about "the little brown frogs": description of three new species of the genus Leptobrachella (Anura: Megophryidae) from Yunnan Province, China. Zool Res, 2020,41(3): 292-313.
Adeola AC, Ewuola MK, Nneji LM, Oguntunji AO, Bello SF, Sola-Ojo FE, Ayoola AO, Adesoji AT, Sanke OJ, Ebiakpo DL, Jonah KN, Jia X, Wu RN, Peng MS, Zhang YP. Mitochondrial DNA variation of Nigerian Muscovy duck (Cairina moschata). Anim Genet, 2020,51(3): 485-486.
Rahman MM, Chen JM, Wu YH, Chen HM, Lwin YH, Murphy RW, Li GG, Che J. New country records for three species of frog from Myanmar including two genera (Nasutixalus and Oreolalax). Zootaxa, 2020, 4742(3): zootaxa.4742.3.7.
Ma YF, Huang CP, Lu FR, Li JX, Han XM, Adeola AC, Gao Y, Deng JK, Xie HB, Zhang YP. OrthReg: a tool to predict cis-regulatory elements based on cross-species orthologous sequence conservation. Zool Res, 2020, 41(4): 471-475.
Nneji LM, Adeola AC, Wang Y-Y, Ajao AM, Anyaele O, Malann Y, Olatunde O, Nneji IC, Ayoola AO, Rahman MM, Adeniyi AV, Okeyoyin A, Olory CS. Testing the Effectiveness of DNA Barcoding for Biodiversity Assessment of Moths from Nigeria. Diversity, 2020, 12(2): 85.
Amiri Ghanatsaman Z, Wang GD, Asadollahpour Nanaei H, Asadi Fozi M, Peng MS, Esmailizadeh A, Zhang YP. Whole genome resequencing of the Iranian native dogs and wolves to unravel variome during dog domestication. BMC Genomics, 2020, 21(1): 207.
Ma C, Khederzadeh S, Adeola AC, Han XM, Xie HB, Zhang YP. Whole genome resequencing reveals an association of ABCC4 variants with preaxial polydactyly in pigs. BMC Genomics, 2020, 21(1): 268.
Ma YF, Adeola AC, Sun YB, Xie HB, Zhang YP. CaptureProbe: a java tool for designing probes for capture Hi-C applications. Zool Res, 2020, 41(1): 94-96.
Shao Y, Tian HY, Zhang JJ, Kharrati-Koopaee H, Guo X, Zhuang XL, Li ML, Nanaie HA, Dehghani Tafti E, Shojaei B, Reza Namavar M, Sotoudeh N, Oluwakemi Ayoola A, Li JL, Liang B, Esmailizadeh A, Wang S, Wu DD. Genomic and Phenotypic Analyses Reveal Mechanisms Underlying Homing Ability in Pigeon. Mol Biol Evol, 2020, 37(1): 134-148.
Liu Q, Yan JW, Hou SB, Wang P, Nguyen SN, Murphy RW, Che J, Guo P. A new species of the genus Sinomicrurus (Serpentes: Elapidae) from China and Vietnam. Zool Res, 202, 41(2):,194-198.
Nneji LM, Adeola AC, Ayoola AO, Oladipo SO, Wang YY, Malann YD, Anyaele O, Nneji IC, Rahman MM, Olory CS. DNA barcoding and species delimitation of butterflies (Lepidoptera) from Nigeria. Mol Biol Rep, 2020, 47(12): 9441-9457.
Peng Guo, Fei Zhu, Qin Liu, Ping Wang, Jing Che, Truong Q. Nguyen. Out of the Hengduan Mountains: Molecular phylogeny and historical biogeography of the Asian water snake genus Trimerodytes (Squamata: Colubridae). Molecular Phylogenetics and Evolution, 2020, 152: 106927.
-
2019
Natatanuran frogs used the Indian Plate to step-stone disperse and radiate across the Indian Ocean
Reconstructing the phylogeny of new world monkeys (platyrrhini) evidence from multiple non-coding loci
The Origin and Population History of the Endangered Golden Snub-Nosed Monkey (Rhinopithecus roxellana)
547 transcriptomes from 44 brain areas reveal features of the aging brain in non-human primates
A new species of Mountain Dragon (Reptilia: Agamidae: Diploderma) from the D. dymondi complex in southern Sichuan Province, China
A new species of the endemic Himalayan genus Liurana (Anura, Ceratobatrachidae) from southeastern Tibet, China, with comments on the distribution, reproductive biology, and conservation of the genus
A new species of the genus Xenophrys (Anura: Megophryidae) from northern Thailand
Artificial selection drives differential gene expression during pig domestication
Canine transmissible venereal tumor genome reveals ancient introgression from coyotes to pre-contact dogs in North America
Confirmation of Trachischium guentheri (Serpentes: Colubridae) from Tibet, China, with description of Tibetan T. monticola
Genetic variation and cryptic lineage diversity of the Nigerian red-headed rock agama Agama agama associate with eco-geographic zones
Genomic and transcriptomic investigations of the evolutionary transition from oviparity to viviparity
Genomic approaches reveal an endemic sub-population of gray wolves in Southern China
Maternal genomic variability of the wild boar (Sus scrofa) reveals the uniqueness of East-Caucasian and Central Italian populations
Nidirana chapaensis (Bourret, 1937), one additional anuran species for the amphibian fauna of China
On the road to Mandalay: contribution to the Microhyla Tschudi, 1838 (Amphibia: Anura: Microhylidae) fauna of Myanmar with description of two new species
Population Genomics Analysis Revealed Origin and High-altitude Adaptation of Tibetan Pigs
Potential dual expansion of domesticated donkeys revealed by worldwide analysis on mitochondrial sequences
Revalidation and resurrection of Panaspis massaiensis (Angel, 1924) and the description of a new species of Panaspis Cope (Squamata: Scincidae) from south-eastern Kenya
The evolutionary genetics of lactase persistence in seven ethnic groups across the Iranian plateau
Whole genomes and transcriptomes reveal adaptation and domestication of pistachio
A new species of the genus Raorchestes (Anura: Rhacophoridae) from Yunnan Province, China.
Multilocus phylogeny and revised classification for mountain dragons of the genus Japalura s.l. (Reptilia: Agamidae: Draconinae) from Asia
Multilocus phylogeography of the brown-spotted pitviper Protobothrops mucrosquamatus (Reptilia: Serpentes: Viperidae) sheds a new light on the diversification pattern in Asia
A New Species of Plateau Pit Viper (Reptilia: Serpentes: Gloydius) from the Upper Lancang (=Mekong) Valley in the Hengduan Mountain Region, Tibet, China.
Yuan ZY, Zhang BL, Raxworthy CJ, Weisrock DW, Hime PM, Jin JQ, Lemmon EM, Lemmon AR, Holland SD, Kortyna ML, Zhou WW, Peng MS, Che J, Prendini E. Natatanuran frogs used the Indian Plate to step-stone disperse and radiate across the Indian Ocean. Natl Sci Rev, 2019, 6(1): 10-14.
Wang X, Lim BK, Ting N, Hu J, Liang Y, Roos C, Yu L. Reconstructing the phylogeny of new world monkeys (platyrrhini): evidence from multiple non-coding loci. Curr Zool, 2019, 65(5): 579-588.
Kuang WM, Ming C, Li HP, Wu H, Frantz L, Roos C, Zhang YP, Zhang CL, Jia T, Yang JY, Yu L. The Origin and Population History of the Endangered Golden Snub-Nosed Monkey (Rhinopithecus roxellana). Mol Biol Evol, 2019, 36(3): 487-499.
Li ML, Wu SH, Zhang JJ, Tian HY, Shao Y, Wang ZB, Irwin DM, Li JL, Hu XT, Wu DD. 547 transcriptomes from 44 brain areas reveal features of the aging brain in non-human primates. Genome Biol, 2019, 20(1): 258.
Wang K, Wu JW, Jiang K, Chen JM, Miao BF, Siler CD, Che J. A new species of Mountain Dragon (Reptilia: Agamidae: Diploderma) from the D. dymondi complex in southern Sichuan Province, China. Zool Res, 2019, 40(5): 456-465.
Jiang K, Wang K, Wang YF, Li C, Che J. A new species of the endemic Himalayan genus Liurana (Anura, Ceratobatrachidae) from southeastern Tibet, China, with comments on the distribution, reproductive biology, and conservation of the genus. Zool Res, 2019, 40(3): 175-184.
Wu YH, Suwannapoom C, Poyarkov NA Jr, Pawangkhanant P, Xu K, Jin JQ, Murphy RW, Che J. A new species of the genus Xenophrys (Anura: Megophryidae) from northern Thailand. Zool Res, 2019, 40(6): 564-574.
Yang Y, Liu C, Adeola AC, Sulaiman X, Xie HB, Zhang YP. Artificial selection drives differential gene expression during pig domestication. J Genet Genomics, 2019, 46(2): 97-100.
Wang X, Zhou BW, Yang MA, Yin TT, Chen FL, Ommeh SC, Esmailizadeh A, Turner MM, Poyarkov AD, Savolainen P, Wang GD, Fu Q, Zhang YP. Canine transmissible venereal tumor genome reveals ancient introgression from coyotes to pre-contact dogs in North America. Cell Res, 2019, 29(7): 592-595.
Wang K, Jiang KE, Jin J, Liu XU, Che J. Confirmation of Trachischium guentheri (Serpentes: Colubridae) from Tibet, China, with description of Tibetan T. monticola. Zootaxa, 2019, 4688(1): zootaxa.4688.1.5.
Nneji LM, Adeola AC, Yan F, Okeyoyin AO, Oladipo OC, Saidu Y, Samuel D, Nneji IC, Adeyi AO, Onadeko AB, Olagunju TE, Omotoso O, Oladipo SO, Iyiola OA, Usongo JY, Auta T, Usman AD, Abdullahi H, Ikhimiukor OO, Zhou WW, Jin JQ, Ugwumba OA, Ugwumba AAA, Peng MS, Murphy RW, Che J. Genetic variation and cryptic lineage diversity of the Nigerian red-headed rock agama Agama agama associate with eco-geographic zones. Curr Zool, 2019, 65(6): 713-724.
Gao W, Sun YB, Zhou WW, Xiong ZJ, Chen L, Li H, Fu TT, Xu K, Xu W, Ma L, Chen YJ, Xiang XY, Zhou L, Zeng T, Zhang S, Jin JQ, Chen HM, Zhang G, Hillis DM, Ji X, Zhang YP, Che J. Genomic and transcriptomic investigations of the evolutionary transition from oviparity to viviparity. Proc Natl Acad Sci U S A, 2019, 116(9): 3646-3655.
Wang GD, Zhang M, Wang X, Yang MA, Cao P, Liu F, Lu H, Feng X, Skoglund P, Wang L, Fu Q, Zhang YP. Genomic Approaches Reveal an Endemic Subpopulation of Gray Wolves in Southern China. iScience, 2019, 20: 110-118.
Khederzadeh S, Kusza S, Huang CP, Markov N, Scandura M, Babaev E, Šprem N, Seryodkin IV, Paule L, Esmailizadeh A, Xie HB, Zhang YP. Maternal genomic variability of the wild boar (Sus scrofa) reveals the uniqueness of East-Caucasian and Central Italian populations. Ecol Evol, 2019, 9(17): 9467-9478.
Yuan Z, Liu X, Wang K, Wang J, Chen J, Jin J, Wei P, Zhou J, Che J. Nidirana chapaensis (Bourret, 1937), one additional anuran species for the amphibian fauna of China. Zootaxa, 2019, 4571(4): zootaxa.4571.4.10.
Poyarkov NA Jr, Gorin VA, Zaw T, Kretova VD, Gogoleva SS, Pawangkhanant P, Che J. On the road to Mandalay: contribution to the Microhyla Tschudi, 1838 (Amphibia: Anura: Microhylidae) fauna of Myanmar with description of two new species. Zool Res, 2019, 40(4): 244-276.
Ma YF, Han XM, Huang CP, Zhong L, Adeola AC, Irwin DM, Xie HB, Zhang YP. Population Genomics Analysis Revealed Origin and High-altitude Adaptation of Tibetan Pigs. Sci Rep, 2019, 9(1): 11463.
Ma XY, Ning T, Adeola AC, Li J, Esmailizadeh A, Lichoti JK, Agwanda BR, Isakova J, Aldashev AA, Wu SF, Liu HQ, Abdulloevich NT, Afanasevna ME, Ibrohimovich KB, Adedokun RAM, Olaogun SC, Sanke OJ, Mangbon GF, Chen X, Yang WK, Wang Z, Peng MS, Ommeh SC, Li Y, Zhang YP. Potential dual expansion of domesticated donkeys revealed by worldwide analysis on mitochondrial sequences. Zool Res, 2020, 41(1): 51-60.
Kilunda FK, Conradie W, Wasonga DV, Jin JQ, Peng MS, Murphy RW, Malonza PK, Che J. Revalidation and resurrection of Panaspis massaiensis (Angel, 1924) and the description of a new species of Panaspis Cope (Squamata: Scincidae) from south-eastern Kenya. Zootaxa, 2019, 4706(2): zootaxa.4706.2.3.
Charati H, Peng MS, Chen W, Yang XY, Jabbari Ori R, Aghajanpour-Mir M, Esmailizadeh A, Zhang YP. The evolutionary genetics of lactase persistence in seven ethnic groups across the Iranian plateau. Hum Genomics, 2019, 13(1): 7.
Zeng L, Tu XL, Dai H, Han FM, Lu BS, Wang MS, Nanaei HA, Tajabadipour A, Mansouri M, Li XL, Ji LL, Irwin DM, Zhou H, Liu M, Zheng HK, Esmailizadeh A, Wu DD. Whole genomes and transcriptomes reveal adaptation and domestication of pistachio. Genome Biol, 2019, 20(1): 79.
Wu YH, Suwannapoom C, Xu K, Chen JM, Jin JQ, Chen HM, Murphy RW, Che J. A new species of the genus Raorchestes (Anura: Rhacophoridae) from Yunnan Province, China. Zool Res, 2019, 40(6): 558-563.
Kai Wang, Jing Che, Simin Lin, V Deepak, Datta-Roy Aniruddha, Ke Jiang, Jieqiong Jin, Hongman Chen, Cameron D Siler, Multilocus phylogeny and revised classification for mountain dragons of the genus Japalura s.l. (Reptilia: Agamidae: Draconinae) from Asia. Zoological Journal of the Linnean Society, 2019, 185(1): 246–267.
Guo P, Liu Q, Zhu F, Zhong GH, Che J, Wang P, Xie YL, Murphy RW, Malhotra A. Multilocus phylogeography of the brown-spotted pitviper Protobothrops mucrosquamatus (Reptilia: Serpentes: Viperidae) sheds a new light on the diversification pattern in Asia. Mol Phylogenet Evol, 2019, 133: 82-91.
Wang, Kai, Jinlong Ren, Wen-Ke Dong, Ke Jiang, Jingsong Shi, Cameron D. Siler and Jing Che. A New Species of Plateau Pit Viper (Reptilia: Serpentes: Gloydius) from the Upper Lancang (=Mekong) Valley in the Hengduan Mountain Region, Tibet, China. Journal of Herpetology 53, (2019): 224-236.
-
2018
Complete mitochondrial genome of Sri Lankan Junglefowl (Gallus lafayetti) and phylogenetic study
Genomic and transcriptomic analyses reveal selection of genes for puberty in Bama Xiang pigs
Large-scale phylogenetic analyses provide insights into unrecognized diversity and historical biogeography of Asian leaf-litter frogs, genus Leptolalax (Anura: Megophryidae).
Mitochondrial DNA sequence variation in Iranian native dogs
Pervasive introgression facilitated domestication and adaptation in the Bos species complex
Selection and environmental adaptation along a path to speciation in the Tibetan frog Nanorana parkeri
The Chinese giant salamander exemplifies the hidden extinction of cryptic species
The uncertainty of population relationship and divergence time inferred by the multiple sequentially Markovian coalescent model
Was chicken domesticated in northern China? New evidence from mitochondrial genomes
A new genus and three new species of miniaturized microhylid frogs from Indochina (Amphibia: Anura: Microhylidae: Asterophryinae)
A new species of cascade frog (Amphibia: Ranidae) in the Amolops monticola group from China
Cenozoic aridization in Central Eurasia shaped diversifification of toad-headed agamas (Phrynocephalus; Agamidae, Reptilia)
Discovery of Japalura chapaensis Bourret, 1937 (Reptilia: Squamata: Agamidae) from Southeast Yunnan Province, China
On the Occurrences of Japalura kumaonensis and Japalura tricarinata (Reptilia: Sauria: Draconinae) in China
Species groups distributed across elevational gradients reveal convergent and continuous genetic adaptation to high elevations
The Chinese giant salamander exemplifies the hidden extinction of cryptic species
Hirimuthugoda NY, Adeola AC, Chen X, Perera PWA, Gunawardena WWDA, Gunwardana HGTN, Yin TT, Wang MS, Li GM, Peng MS, Zhang YP. Complete mitochondrial genome of Sri Lankan Junglefowl (Gallus lafayetti) and phylogenetic study. Mitochondrial DNA B Resour, 2018, 3(1): 83-84.
Yang Y, Adeola AC, Xie HB, Zhang YP. Genomic and transcriptomic analyses reveal selection of genes for puberty in Bama Xiang pigs. Zool Res, 2018 , 39(6): 424-430.
Chen JM, Poyarkov NA Jr, Suwannapoom C, Lathrop A, Wu YH, Zhou WW, Yuan ZY, Jin JQ, Chen HM, Liu HQ, Nguyen TQ, Nguyen SN, Duong TV, Eto K, Nishikawa K, Matsui M, Orlov NL, Stuart BL, Brown RM, Rowley JJL, Murphy RW, Wang YY, Che J. Large-scale phylogenetic analyses provide insights into unrecognized diversity and historical biogeography of Asian leaf-litter frogs, genus Leptolalax (Anura: Megophryidae). Mol Phylogenet Evol, 2018, 124: 162-171.
Amiri Ghanatsaman Z, Adeola AC, Asadi Fozi M, Ma YP, Peng MS, Wang GD, Esmailizadeh A, Zhang YP. Mitochondrial DNA sequence variation in Iranian native dogs. Mitochondrial DNA A DNA Mapp Seq Anal, 2018, 29(3): 394-402.
Wu DD, Ding XD, Wang S, Wójcik JM, Zhang Y, Tokarska M, Li Y, Wang MS, Faruque O, Nielsen R, Zhang Q, Zhang YP. Pervasive introgression facilitated domestication and adaptation in the Bos species complex. Nat Ecol Evol, 2018, 2(7): 1139-1145.
Wang GD, Zhang BL, Zhou WW, Li YX, Jin JQ, Shao Y, Yang HC, Liu YH, Yan F, Chen HM, Jin L, Gao F, Zhang Y, Li H, Mao B, Murphy RW, Wake DB, Zhang YP, Che J. Selection and environmental adaptation along a path to speciation in the Tibetan frog Nanorana parkeri. Proc Natl Acad Sci U S A, 2018, 115(22): E5056-E5065.
Yan F, Lü J, Zhang B, Yuan Z, Zhao H, Huang S, Wei G, Mi X, Zou D, Xu W, Chen S, Wang J, Xie F, Wu M, Xiao H, Liang Z, Jin J, Wu S, Xu C, Tapley B, Turvey ST, Papenfuss TJ, Cunningham AA, Murphy RW, Zhang Y, Che J. The Chinese giant salamander exemplifies the hidden extinction of cryptic species. Curr Biol, 2018, 28(10): R590-R592.
Yang XY, Dai SS, Liu HQ, Peng MS, Zhang YP. The uncertainty of population relationship and divergence time inferred by the multiple sequentially Markovian coalescent model. J Hum Genet, 2018, 63(6): 775-777.
Huang XH, Wu YJ, Miao YW, Peng MS, Chen X, He DL, Suwannapoom C, Du BW, Li XY, Weng ZX, Jin SH, Song JJ, Wang MS, Chen JB, Li WN, Otecko NO, Geng ZY, Qu XY, Wu YP, Yang XR, Jin JQ, Han JL, Zhong FS, Zhang XQ, Zhang YP. Was chicken domesticated in northern China? New evidence from mitochondrial genomes. Sci Bull (Beijing), 2018, 63(12): 743-746.
Poyarkov NA Jr, Suwannapoom C, Pawangkhanant P, Aksornneam A, Duong TV, Korost DV, Che J. A new genus and three new species of miniaturized microhylid frogs from Indochina (Amphibia: Anura: Microhylidae: Asterophryinae). Zool Res, 2018, 39(3): 130-157.
Yuan Z, Jin J, Li J, Stuart BL, Wu J. A new species of cascade frog (Amphibia: Ranidae) in the Amolops monticola group from China. Zootaxa, 2018, 4415(3): 498-512.
Solovyeva EN, Lebedev VS, Dunayev EA, Nazarov RA, Bannikova AA, Che J, Murphy RW, Poyarkov NA. Cenozoic aridization in Central Eurasia shaped diversification of toad-headed agamas (Phrynocephalus; Agamidae, Reptilia). PeerJ, 2018,6: e4543.
Wang K, Jiang K, Wang YF, Poyarkov NA Jr, Che J, Siler CD. Discovery of Japalura chapaensis Bourret, 1937 (Reptilia: Squamata: Agamidae) from Southeast Yunnan Province, China. Zool Res, 2018, 39(2): 105-113.
Kai Wang, Ke Jiang, V. Deepak, Das Abhijit, Mian Hou, Jing Che, Cameron D. Siler; On the Occurrences of Japalura kumaonensis and Japalura tricarinata (Reptilia: Sauria: Draconinae) in China. Herpetologica, 2018, 74 (2): 181–190.
Sun YB, Fu TT, Jin JQ, Murphy RW, Hillis DM, Zhang YP, Che J. Species groups distributed across elevational gradients reveal convergent and continuous genetic adaptation to high elevations. Proc Natl Acad Sci U S A, 2018, 115(45): E10634-E10641.
Yan F, Lü J, Zhang B, Yuan Z, Zhao H, Huang S, Wei G, Mi X, Zou D, Xu W, Chen S, Wang J, Xie F, Wu M, Xiao H, Liang Z, Jin J, Wu S, Xu C, Tapley B, Turvey ST, Papenfuss TJ, Cunningham AA, Murphy RW, Zhang Y, Che J. The Chinese giant salamander exemplifies the hidden extinction of cryptic species. Curr Biol, 2018, 28(10): R590-R592.
-
2017
A new species of rain-pool frog (Dicroglossidae: Fejervarya) from western Thailand
A new species of the genus Amolops (Anura: Ranidae) from high-altitude Sichuan, southwestern China, with a discussion on the taxonomic status of Amolops kangtingensis
A new species of the genus Rana from Henan, central China (Anura, Ranidae)
A novel multilocus phylogenetic estimation reveals unrecognized diversity in Asian horned toads, genus Megophrys sensu lato (Anura: Megophryidae)
Molecular, morphological and acoustic assessment of the genus Ophryophryne (Anura, Megophryidae) from Langbian Plateau, southern Vietnam, with description of a new species
Rediscovery of the enigmatic Mountain Dragon, Japalura yulongensis (Reptilia: Sauria: Agamidae), with notes on its natural history and conservation
The taxonomic status and distribution range of six Theloderma species (Anura: Rhacophoridae) with a new record in China
Suwannapoom C, Yuan ZY, Jiang K, Yan F, Gao W, Che J. A new species of rain-pool frog (Dicroglossidae: Fejervarya) from western Thailand. Zool Res, 2017, 38(5): 243-250.
Fei L, Ye CY, Wang YF, Jiang K. A new species of the genus Amolops (Anura: Ranidae) from high-altitude Sichuan, southwestern China, with a discussion on the taxonomic status of Amolops kangtingensis. Zool Res, 2017, 38(3): 138-145.
Zhao H, Yang J, Wang C, Li P, Murphy RW, Che J, Yuan Z. A new species of the genus Rana from Henan, central China (Anura, Ranidae). Zookeys, 2017,(694): 95-108.
Chen JM, Zhou WW, Poyarkov NA Jr, Stuart BL, Brown RM, Lathrop A, Wang YY, Yuan ZY, Jiang K, Hou M, Chen HM, Suwannapoom C, Nguyen SN, Duong TV, Papenfuss TJ, Murphy RW, Zhang YP, Che J. A novel multilocus phylogenetic estimation reveals unrecognized diversity in Asian horned toads, genus Megophrys sensu lato (Anura: Megophryidae). Mol Phylogenet Evol, 2017, 106: 28-43.
Poyarkov NA Jr, Duong TV, Orlov NL, Gogoleva SS, Vassilieva AB, Nguyen LT, Nguyen VDH, Nguyen SN, Che J, Mahony S. Molecular, morphological and acoustic assessment of the genus Ophryophryne (Anura, Megophryidae) from Langbian Plateau, southern Vietnam, with description of a new species. Zookeys, 2017, (672): 49-120.
Wang K, Ren J, Jiang K, Yuan Z, Che J, & Siler CD. Rediscovery of the enigmatic Mountain Dragon, Japalura yulongensis (Reptilia: Sauria: Agamidae), with notes on its natural history and conservation. Zootaxa, 2017,4318: 351-363.
Mian H, Guo-hua Y, Hong-man C, Chang-le L, Li Z, Jin C, Pi-peng L, & Orlov NL. The Taxonomic Status and Distribution Range of Six Theloderma Species (Anura: Rhacophoridae) with a New Record in China. Russian Journal of Herpetology, 2017,24: 99-127.
-
2016
A new species of the genus Scutiger (Anura: Megophryidae) from southeastern Tibet, China.
Cytonuclear Discordance, Cryptic Diversity, Complex Histories, and Conservation Needs in Vietnamese Bent-toed Geckos of the Cyrtodactylus irregularis Species Complex
A new genus and species of treefrog from Medog, southeastern Tibet, China (Anura, Rhacophoridae)
A new species of genus Fejervarya (Anura: Dicroglossidae) from northern Thailand
A new species of the genus Amolops (Amphibia: Ranidae) from southeastern Tibet, China
A new species of the genus Leptolalax (Anura: Megophryidae) from Guangxi, China
A new species of the genus Pachytriton (Caudata: Salamandridae) from Hunan and Guangxi, southeastern China
A new species of the genus Paramesotriton (Caudata: Salamandridae) from Fujian, southeastern China
AmphibiaChina: an online database of Chinese Amphibians
Complex longitudinal diversification across South China and Vietnam in Stejneger's pit viper, Viridovipera stejnegeri (Schmidt, 1925) (Reptilia: Serpentes: Viperidae)
Discovery of Female Laudakia papenfussi Zhao, 1998, with Insights into its Phylogenetic Relationships
Mountains too high and valleys too deep drive population structuring and demographics in a Qinghai-Tibetan Plateau frog Nanorana pleskei (Dicroglossidae)
Red River barrier and Pleistocene climatic fluctuations shaped the genetic structure of Microhyla fissipes complex (Anura: Microhylidae) in southern China and Indochina
Taxonomic revision of the Chinese Limnonectes (Anura, Dicroglossidae) with the description of a new species from China and Myanmar
The Australasian frog family Ceratobatrachidae in China, Myanmar and Thailand: discovery of a new Himalayan forest frog clade
Two new species of Japalura (Squamata: Agamidae) from the Hengduan Mountain Range, China.
Jiang K, Wang K, Zou DH, Yan F, Li PP, Che J. A new species of the genus Scutiger (Anura: Megophryidae) from Medog of southeastern Tibet, China. Zoological Research, 2016, 37(1): 21-30.
N.A. Cairns, A.S. Cicchino, K.A. Stewart, J.D. Austin, S.C. Lougheed. Cytonuclear discordance, reticulation and cryptic diversity in one of North America's most common frogs. Molecular Phylogenetics and Evolution, 2021, 156: 107042.
Jiang K, Yan F, Wang K, Zou DH, Li C, Che J. A new genus and species of treefrog from Medog, southeastern Tibet, China (Anura, Rhacophoridae). Zoological Research, 2016, 37(1): 15-20.
Suwannapoom C, Yuan ZY, A Poyarkov N Jr, Yan F, Kamtaeja S, W Murphy R, Che J. A new species of genus Fejervarya (Anura: Dicroglossidae) from northern Thailand. Zool Res, 2016, 37(6): 327-337.
Jiang K, Wang K, Yan F, Xie J, Zou DH, Liu WL, Jiang JP, Li C, Che J. A new species of the genus Amolops (Amphibia: Ranidae) from southeastern Tibet, China. Zoological Research, 2016, 37(1): 31-40.
Yuan Z, Sun R, Chen J, Rowley JJL, Wu Z, Hou S, Wang S and Che J. A new species of the genus Leptolalax (Anura: Megophryidae) from Guangxi, China. Zootaxa, 2016, 4300(4): 551-570.
Yuan ZY, Zhang BL, Che J. A new species of the genus Pachytriton (Caudata: Salamandridae) from Hunan and Guangxi, southeastern China. Zootaxa, 2016, 4085(2): 219-32.
Yuan Z, Wu Y, Zhou J, Che J. A new species of the genus Paramesotriton (Caudata: Salamandridae) from Fujian, southeastern China. Zootaxa, 2016, 4205(6): zootaxa.4205.6.3.
Che J, Wang K. AmphibiaChina: an online database of Chinese Amphibians. Zoological Research, 2016, 37(01): 57-59.
Guo P, Liu Q, Zhu F, Zhong GH, Chen X, Myers EA, Che J, Zhang L, Ziegler T, Nguyen TQ, Burbrink FT. Complex longitudinal diversification across South China and Vietnam in Stejneger's pit viper, Viridovipera stejnegeri (Schmidt, 1925) (Reptilia: Serpentes: Viperidae). Mol Ecol, 2016, 25(12): 2920-36.
Dahu, Zou, Fang, Yan, Ke, Jiang, Jing, Che, Róbert, Murphy, Théodore, Papenfuss, Shuang-quan, Duan, Song and Huang. Discovery of Female Laudakia papenfussi Zhao, 1998, with Insights into its Phylogenetic Relationships. 2016.
Zhou W, Jin J, Wu J, Chen H, Yang J, Murphy RW, Che J. Mountains too high and valleys too deep drive population structuring and demographics in a Qinghai-Tibetan Plateau frog Nanorana pleskei (Dicroglossidae). Ecol Evol, 2016, 7(1): 240-252.
Yuan ZY, Suwannapoom C, Yan F, Poyarkov NA Jr, Nguyen SN, Chen HM, Chomdej S, Murphy RW, Che J. Red River barrier and Pleistocene climatic fluctuations shaped the genetic structure of Microhyla fissipes complex (Anura: Microhylidae) in southern China and Indochina. Curr Zool, 2016, 62(6): 531-543.
Suwannapoom C, Yuan ZY, Chen JM, Hou M, Zhao HP, Wang LJ, Nguyen TS, Nguyen TQ, Murphy RW, Sullivan J, Mcleod DS, Che J. Taxonomic revision of the Chinese Limnonectes (Anura, Dicroglossidae) with the description of a new species from China and Myanmar. Zootaxa, 2016, 4093(2): 181-200.
Yan F, Jiang K, Wang K, Jin JQ, Suwannapoom C, Li C, Vindum JV, Brown RM, Che J. The Australasian frog family Ceratobatrachidae in China, Myanmar and Thailand: discovery of a new Himalayan forest frog clade. Zoological Research, 2016, 37(1): 7-14.
Wang K, Jiang K, Zou DH, Yan F, Siler CD, Che J. Two new species of Japalura (Squamata: Agamidae) from the Hengduan Mountain Range, China. Zoological Research, 2016, 37(1):41-56.
-
2015
A New Species of Japalura (Squamata: Sauria: Agamidae) from Upper Lancang (Mekong) Valley of Eastern Tibet, China
Whole-genome sequence of the Tibetan frog Nanorana parkeri and the comparative evolution of tetrapod genomes
Kai WANG, Ke JIANG, Gang PAN, Mian HOU, Cameron D. SILER and Jing CHE. A New Species of Japalura (Squamata: Sauria: Agamidae) from Upper Lancang (Mekong) Valley of Eastern Tibet, China. Asian Herpetological Research, 2015, 6(3): 159-168.
Sun YB, Xiong ZJ, Xiang XY, Liu SP, Zhou WW, Tu XL, Zhong L, Wang L, Wu DD, Zhang BL, Zhu CL, Yang MM, Chen HM, Li F, Zhou L, Feng SH, Huang C, Zhang GJ, Irwin D, Hillis DM, Murphy RW, Yang HM, Che J, Wang J, Zhang YP. Whole-genome sequence of the Tibetan frog Nanorana parkeri and the comparative evolution of tetrapod genomes. Proc Natl Acad Sci U S A, 2015, 112(11): E1257-62.
